SubtiBank SubtiBank
ydeC [2017-8-11 16:0:3]
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ydeC [2017-8-11 16:0:3]

similar to transcription factor (AraC family)
locus
BSU05150
pI
6.87
mw
34.07 kDa
protein length
291 aa Sequence Blast
gene length
873 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.2|Transcription factors and their control] → [category|SW 3.4.2.6|Transcription factor/ other/ based on similarity]
  • [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.1|General stress proteins (controlled by SigB)]

    • Gene

    Coordinates
    561,514 → 562,389

    The protein

    Protein family

  • [SW|AraC family]

    • Expression and Regulation

    Operons

    genes
    [gene|24A86A4846187E6026A2B7645DC4B7C70908942E|ydeC]-[gene|CBEB1C62D727CF320E82C3ED636894B50F11E0AE|ydzE]
    description
    [pubmed|22383849]

    sigma factors

  • [protein|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB]: sigma factor, [Pubmed|11532142], in [regulon|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB regulon]
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    Biological materials

    Mutant

  • MGNA-C079 (ydeC::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2077 NBRP B. subtilis, Japan]

    • References

  • 23504016